{"id":42,"date":"2019-03-26T09:55:36","date_gmt":"2019-03-26T08:55:36","guid":{"rendered":"https:\/\/blogs.urz.uni-halle.de\/eckmannlab\/?page_id=42"},"modified":"2019-11-27T10:31:26","modified_gmt":"2019-11-27T09:31:26","slug":"publications","status":"publish","type":"page","link":"https:\/\/blogs.urz.uni-halle.de\/eckmannlab\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"<h6><a href=\"https:\/\/scholar.google.de\/citations?user=0bWVya8AAAAJ&amp;hl=de&amp;oi=ao\" target=\"_blank\" rel=\"noopener noreferrer\">Link to Google Scholar &gt;<\/a><\/h6>\n<h6><a href=\"https:\/\/orcid.org\/0000-0002-1112-4936\" target=\"_blank\" rel=\"noopener noreferrer\">Link to Orcid &gt;<\/a> \/ORCID ID: 0000-0002-1112-4936<\/h6>\n<p><em>2019<br \/>\n<\/em>Nousch M, Yeroslaviz A, Eckmann CR<br \/>\n<strong>Stage-specific combinations of opposing poly(A) modifying enzymes guide gene expression during early oogenesis<\/strong><br \/>\n<a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/31511882\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> &#8211; 2019. Nucleic Acids Res 47(20):10881-10893.<\/p>\n<p><em>2018<br \/>\n<\/em>Kisielnicka E, Minasaki R, Eckmann CR<br \/>\n<strong>MAPK signaling couples SCF-mediated degradation of translational regulators to oocyte meiotic progression<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/29496961\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2018. Proc Natl Acad Sci U S A 115(12):2772-2781.<\/p>\n<h6><em>2017<\/em><\/h6>\n<p>Nousch M, Minasaki R, Eckmann CR<br \/>\n<strong>Polyadenylation is the key aspect of GLD-2 function in <em>C. elegans<br \/>\n<\/em><\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/28490506\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2017. RNA 23(8):1180-1187.<\/p>\n<h6><em>2016<\/em><\/h6>\n<p>Saha S, Weber CA, Nousch M, Adame-Arana O, Hoege C, Hein MY, Osborne-Nishimura E, Mahamid J, Jahnel M, Jawerth L, Pozniakovski A, Eckmann CR, J\u00fclicher F, Hyman AA<br \/>\n<strong>Polar Positioning of Phase-Separated Liquid Compartments in Cells Regulated by an mRNA Competition Mechanism<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/27594427\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2016. Cell 166(6):1572-1584.e16.<\/p>\n<p>Nakel K, Bonneau F, Basquin C, Habermann B, Eckmann CR, Conti E<br \/>\n<strong>Structural basis for the antagonistic roles of RNP-8 and GLD-3 in GLD-2 poly(A)-polymerase activity<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/27288313\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2016. RNA 22(8):1139-45.<\/p>\n<p>Millonigg S, Minasaki R, Nousch M, Novak J, Eckmann CR<br \/>\n<strong>Correction: GLD-4-Mediated Translational Activation Regulates the Size of the Proliferative Germ Cell Pool in the Adult C. elegans Germ Line<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/26859383\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2016. PLoS Genet 12(2):e1005862.<\/p>\n<h6><em>2015<\/em><\/h6>\n<p>Nousch M, Eckmann CR<br \/>\n<strong>Translational activation maintains germline tissue homeostasis during adulthood<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/26430565\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2015. Worm 4(3):e1042644.<\/p>\n<p>Nakel K, Bonneau F, Eckmann CR, Conti E<br \/>\n<strong>Structural basis for the activation of the C. elegans noncanonical cytoplasmic poly(A)-polymerase GLD-2 by GLD-3<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/26124149\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2015. Proc Natl Acad Sci U S A 112(28):8614-9.<\/p>\n<p>Elbaum-Garfinkle S, Kim Y, Szczepaniak K, Chen CC, Eckmann CR, Myong S, Brangwynne CP<br \/>\n<strong>The disordered P granule protein LAF-1 drives phase separation into droplets with tunable viscosity and dynamics<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/26015579\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2015. Proc Natl Acad Sci U S A 112(23):7189-94.<\/p>\n<h6><em>2014<\/em><\/h6>\n<p>Minasaki R, Rudel D, Eckmann CR<br \/>\n<strong>Increased sensitivity and accuracy of a single-stranded DNA splint-mediated ligation assay (sPAT) reveals poly(A) tail length dynamics of developmentally regulated mRNAs<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/24526206\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2014. RNA Biol 11(2):111-23.<\/p>\n<p>Millonigg S, Minasaki R, Nousch M, Novak J, Eckmann CR<br \/>\n<strong>GLD-4-mediated translational activation regulates the size of the proliferative germ cell pool in the adult C. elegans germ line<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/25254367\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract <\/a>\u2013 2014. PLoS Genet 10(9):e1004647.<\/p>\n<p>Nousch M, Yeroslaviz A, Habermann B, Eckmann CR<br \/>\n<strong>The cytoplasmic poly(A) polymerases GLD-2 and GLD-4 promote general gene expression via distinct mechanisms<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/25217583\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2014. Nucleic Acids Res 42(18):11622-33.<\/p>\n<h6><em>2013<\/em><\/h6>\n<p>Gracida X, Eckmann CR<br \/>\n<strong>Mind the gut: Dietary impact on germline stem cells and fertility<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/24563704\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2013. Commun Integr Biol 6(6):e26004.<\/p>\n<p>Nousch M, Techritz N, Hampel D, Millonigg S, Eckmann CR<br \/>\n<strong>The Ccr4-Not deadenylase complex constitutes the main poly(A) removal activity in C. elegans<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/23843623\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2013. J Cell Sci 126(Pt 18):4274-85.<\/p>\n<p>Gracida X, Eckmann CR<br \/>\n<strong>Fertility and germline stem cell maintenance under different diets requires nhr-114\/HNF4 in C. elegans<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/23499532\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2013. Curr Biol 23(7):607-13.<\/p>\n<p>Nousch M, Eckmann CR<br \/>\n<strong>Translational control in the Caenorhabditis elegans germ line<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/22872479\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2013. Adv Exp Med Biol 757:205-47.<\/p>\n<h6><em>2012<\/em><\/h6>\n<p>Minasaki R, Eckmann CR<br \/>\n<strong>Subcellular specialization of multifaceted 3&#8217;end modifying nucleotidyltransferases<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/22551970\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2012. Curr Opin Cell Biol 24(3):314-22.<\/p>\n<h6><em>2011<\/em><\/h6>\n<p>Eckmann CR, Rammelt C, Wahle E<br \/>\n<strong>Control of poly(A) tail length<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/21957022\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2011. Wiley Interdiscip Rev RNA 2(3):348-61.<\/p>\n<h6><em>2010<br \/>\n<\/em><\/h6>\n<p>Nakel K, Hartung SA, Bonneau F, Eckmann CR, Conti E<br \/>\n<strong>Four KH domains of the C. elegans Bicaudal-C ortholog GLD-3 form a globular structural platform<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20823118\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2010. RNA 16(11):2058-67.<\/p>\n<p>Kupinski AP, M\u00fcller-Reichert T, Eckmann CR<br \/>\n<strong>The Caenorhabditis elegans Ste20 kinase, GCK-3, is essential for postembryonic developmental timing and regulates meiotic chromosome segregation<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20595048\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2010. Dev Biol 44(2):758-71.<\/p>\n<p>M\u00fcller M, Neugebauer KM, Eckmann CR<br \/>\n<strong>mRNA: a complex(ed) life<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20500909\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2010. Genome Biol 11(5):304.<\/p>\n<h6><em>2009<\/em><\/h6>\n<p>Jedamzik B, Eckmann CR<br \/>\n<strong>Analysis of RNA-protein complexes by RNA coimmunoprecipitation and RT-PCR analysis from Caenorhabditis elegans<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20147045\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2009. Cold Spring Harb Protoc (10):pdb.prot5300.<\/p>\n<p>Jedamzik B, Eckmann CR<br \/>\n<strong>Analysis of in vivo protein complexes by coimmunoprecipitation from Caenorhabditis elegans<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20147044\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2009. Cold Spring Harb Protoc (10):pdb.prot5299.<\/p>\n<p>Wojtasz L, Daniel K, Roig I, Bolcun-Filas E, Xu H, Boonsanay V, Eckmann CR, Cooke HJ, Jasin M, Keeney S, McKay MJ, Toth A<br \/>\n<strong>Mouse HORMAD1 and HORMAD2, two conserved meiotic chromosomal proteins, are depleted from synapsed chromosome axes with the help of TRIP13 AAA-ATPase<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/19851446\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2009. PLoS Genet 5(10):e1000702.<\/p>\n<p>Rybarska A, Harterink M, Jedamzik B, Kupinski AP, Schmid M, Eckmann CR<br \/>\n<strong>GLS-1, a novel P granule component, modulates a network of conserved RNA regulators to influence germ cell fate decisions<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/19461891\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2009. PLoS Genet 5(5):e1000494.<\/p>\n<p>Brangwynne CP, Eckmann CR, Courson DS, Rybarska A, Hoege C, Gharakhani J, J\u00fclicher F, Hyman AA<br \/>\n<strong>Germline P granules are liquid droplets that localize by controlled dissolution\/condensation<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/19460965\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2009. Science 324(5935):1729-32.<\/p>\n<p>Schmid M, K\u00fcchler B<strong>, <\/strong>Eckmann CR<br \/>\n<strong>Two conserved regulatory cytoplasmic poly(A) polymerases, GLD-4 and GLD-2, regulate meiotic progression in C. elegans<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/19339688\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2009. Genes Dev 23(7):824-36.<\/p>\n<h6><em>2006<\/em><\/h6>\n<p>Suh N, Jedamzik B, Eckmann CR, Wickens M, Kimble J<br \/>\n<strong>The GLD-2 poly(A) polymerase activates gld-1 mRNA in the Caenorhabditis elegans germ line<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/17012378\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2006. Proc Natl Acad Sci U S A 103(41):15108-12.<\/p>\n<h6><em>2004<\/em><\/h6>\n<p>Eckmann CR, Crittenden SL, Suh N, Kimble J<br \/>\n<strong>GLD-3 and control of the mitosis\/meiosis decision in the germline of Caenorhabditis elegans<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/15454534\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2004. Genetics 168(1):147-60.<\/p>\n<h6><em>2003<\/em><\/h6>\n<p>Crittenden SL, Eckmann CR, Wang L, Bernstein DS, Wickens M, Kimble J<br \/>\n<strong>Regulation of the mitosis\/meiosis decision in the Caenorhabditis elegans germline<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/14511482\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2003. Philos Trans R Soc Lond B Biol Sci 358(1436):1359-62.<\/p>\n<h6><em>2002<\/em><\/h6>\n<p>Eckmann CR, Kraemer B, Wickens M, Kimble J<br \/>\n<strong>GLD-3, a bicaudal-C homolog that inhibits FBF to control germline sex determination in C. elegans<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/12431376\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2002. Dev Cell 3(5):697-710.<\/p>\n<p>Wang L, Eckmann CR, Kadyk LC, Wickens M, Kimble J<br \/>\n<strong>A regulatory cytoplasmic poly(A) polymerase in Caenorhabditis elegans<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/12239571\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2002. Nature 419(6904):312-6.<\/p>\n<h6><em>2001<\/em><\/h6>\n<p>Eckmann CR, Neunteufl A, Pfaffstetter L, Jantsch MF<br \/>\n<strong>The human but not the Xenopus RNA-editing enzyme ADAR1 has an atypical nuclear localization signal and displays the characteristics of a shuttling protein<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/11451992\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 2001. Mol Biol Cell 12(7):1911-24<\/p>\n<h6><em>1999<\/em><\/h6>\n<p>Eckmann CR, Jantsch MF<br \/>\n<strong>The RNA-editing enzyme ADAR1 is localized to the nascent ribonucleoprotein matrix on Xenopus lampbrush chromosomes but specifically associates with an atypical loop<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/10037784\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 1999. J Cell Biol 144(4):603-15.<\/p>\n<h6><em>1998<\/em><\/h6>\n<p>Brooks R, Eckmann CR, Jantsch MF<br \/>\n<strong>The double-stranded RNA-binding domains of Xenopus laevis ADAR1 exhibit different RNA-binding behaviors<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/9738463\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 1998. FEBS Lett 434(1-2):121-6.<\/p>\n<h6><em>1997<\/em><\/h6>\n<p>Eckmann CR, Jantsch MF<br \/>\n<strong>Xlrbpa, a double-stranded RNA-binding protein associated with ribosomes and heterogeneous nuclear RNPs<br \/>\n<\/strong><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/9230068\" target=\"_blank\" rel=\"noopener noreferrer\">Abstract<\/a> \u2013 1997. J Cell Biol 138(2):239-53.<a class=\"anchor\" name=\"anchor3004671\"><\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Link to Google Scholar &gt; Link to Orcid &gt; \/ORCID ID: 0000-0002-1112-4936 2019 Nousch M, Yeroslaviz A, Eckmann CR Stage-specific combinations of opposing poly(A) modifying enzymes guide gene expression during early oogenesis Abstract &#8211; 2019. Nucleic Acids Res 47(20):10881-10893. 2018 <a class=\"more-link\" href=\"https:\/\/blogs.urz.uni-halle.de\/eckmannlab\/publications\/\">Continue reading <span class=\"screen-reader-text\">  Publications<\/span><span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":4020,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":[],"_links":{"self":[{"href":"https:\/\/blogs.urz.uni-halle.de\/eckmannlab\/wp-json\/wp\/v2\/pages\/42"}],"collection":[{"href":"https:\/\/blogs.urz.uni-halle.de\/eckmannlab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/blogs.urz.uni-halle.de\/eckmannlab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/blogs.urz.uni-halle.de\/eckmannlab\/wp-json\/wp\/v2\/users\/4020"}],"replies":[{"embeddable":true,"href":"https:\/\/blogs.urz.uni-halle.de\/eckmannlab\/wp-json\/wp\/v2\/comments?post=42"}],"version-history":[{"count":10,"href":"https:\/\/blogs.urz.uni-halle.de\/eckmannlab\/wp-json\/wp\/v2\/pages\/42\/revisions"}],"predecessor-version":[{"id":836,"href":"https:\/\/blogs.urz.uni-halle.de\/eckmannlab\/wp-json\/wp\/v2\/pages\/42\/revisions\/836"}],"wp:attachment":[{"href":"https:\/\/blogs.urz.uni-halle.de\/eckmannlab\/wp-json\/wp\/v2\/media?parent=42"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}